Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806116.1_cds_XP_016494209.1_8644
CDS Infomation

[gene=LOC107813446] [db_xref=GeneID:107813446] [protein=probable nucleolar protein 5-2] [protein_id=XP_016494209.1] [location=join(2218..2295,2389..2430,3022..3201,3293..3457,4302..4502,4764..5261,5350..5484,5557..5934)] [gbkey=CDS]
Sequence

ATGTTGGTATTGTTTGAAACACCGGCAGGTTTTGCCCTTTTCAAAGTTTTGGATGAGGGA
AAGCTCTCCAAAGTTGAGGATTTGTGGAAAGAGTTCTCCTCAACTGATTCTGCCCGAAAG
GTTGTGAAGCTAAAAGCTTTCTCCAAGTTTGAGAACACCTCAGAAGCTCTGTCAGCAGCT
ACTTTGTTGATAGATAGCAAGCCCAGCAAAGGATTGCGCAAGTTTTTGAAAGCTCACTGT
GATGGTGAAACTTTGGGTGTTGCTGATTCAAAACTTGGAAATGCAATTAAAGAGAAACTG
CAAATTGACTGTGTTCACAATAATGCTGTCATGGAATTGATGAGAGGGGTGAGAAGTCAG
TTGACTGAGCTCATAACTGGTCTTGGATCTCAAGACTTGGCTCCAATGAGCTTGGGTTTA
TCTCATAGTCTTTCAAGATACAAGCTAAAGTTTAGCCCTGACAAGGTGGATACGATGATT
GTACAAGCCATTAGCTTGTTGGATGACCTTGATAAAGAGCTAAACACATATGCCATGAGG
GTCCGAGAATGGTATGGTTGGCATTTTCCGGAGCTTGCAAAGATTGTACAAGATAACATT
TTATATGCCAAGGCTGTGAAGTTGATGGGCGACCGTGTAAATGCGGCAAAGCTGGATTTC
TCTGAGATACTGCCAGAAGAGGTTGAGGCAGAATTGAAAGAGGCATCCATGATTTCCATG
GGGACTGAAGTTAGTGATCTTGATCTGGAGAATATTAAAGATTTATGCAGCCAAGTTCTG
TCATTCTCCGAGTACAGAGCTCAGTTATATGATTATTTGAAGAGCAGGATGAACACGATT
GCCCCAAATCTTACGGCTCTAGTTGGAGAACTTGTTGGTGCTCGGCTTATTGCCCATGGC
GGCAGCTTGTTGAATCTTGCAAAGCAACCTGGAAGTACAGTTCAGATACTTGGTGCTGAA
AAGGCTCTTTTCAGAGCTTTAAAGACGAAGCATGCAACTCCGAAATACGGGCTTATATAT
CATGCTTCTTTGATTGGACAGGCAGCACCAAAACACAAGGGTAAAATCTCAAGATCTCTA
GCAGCAAAAACTGCTTTGGCAATTCGATACGATGCTCTTGCTGATAGCCAAGATAATACC
ATGGGTTTGGAGAATCGGGCCAAGCTTGAAGCACGCTTAAGAGCCTTAGAGGGCAAAGAG
TTGGGCAAGTCAGCTGGGTCTGCCAAAGGCAAACCAAAGATTGAAGTCTATGACAAGGAT
CGCAAAAAGGGTGCAGGAGCACTGATAACACCAGCTAAGGTTTACAACCCTGCTGCCGAT
TCTGTTATTGGACACACTGAGAATGAGGAGAAGATGAGTATAGATGGACAGCCATCTCAA
ATTAAGGAAGCAGCTGGGGAGGTTCCCGTCACTGAAGGAGAGAAGAAAAAGAAGAAGAAG
AAGAAGTCTGCAGAAACAGAGGATAATGCTGTAGCAACTGATGCTGCAGAACCCGAAGAC
ACTGGGAAGAAGGAGAAGAAGAAAAAGAAGAAGCATGCAGAGGAAGTCGAAAGCGTAGAA
GTGGAAAAAAGTAAGAAAAAGAAGAGGAAACATGCTGATGCTGATGAGGATGAAGCAGAA
AGCACGGATAAAAAGAAAGACAAGAAGAAGAAGAAGAAGAAGAAGACTGAAGAATAA

Peptide Sequence

PEP ID

XP_016494209.1
PEP Infomation

PREDICTED: probable nucleolar protein 5-2 [Nicotiana tabacum]
Sequence

MLVLFETPAGFALFKVLDEGKLSKVEDLWKEFSSTDSARKVVKLKAFSKFENTSEALSAA
TLLIDSKPSKGLRKFLKAHCDGETLGVADSKLGNAIKEKLQIDCVHNNAVMELMRGVRSQ
LTELITGLGSQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNTYAMR
VREWYGWHFPELAKIVQDNILYAKAVKLMGDRVNAAKLDFSEILPEEVEAELKEASMISM
GTEVSDLDLENIKDLCSQVLSFSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHG
GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKHKGKISRSL
AAKTALAIRYDALADSQDNTMGLENRAKLEARLRALEGKELGKSAGSAKGKPKIEVYDKD
RKKGAGALITPAKVYNPAADSVIGHTENEEKMSIDGQPSQIKEAAGEVPVTEGEKKKKKK
KKSAETEDNAVATDAAEPEDTGKKEKKKKKKHAEEVESVEVEKSKKKKRKHADADEDEAE
STDKKKDKKKKKKKKTEE

Transcript Sequence

Gene sequence data has not been registered.